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  • Top cofit genes for PS417_06780 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator
    SEED: Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family
    KEGG: TetR/AcrR family transcriptional regulator, acrAB operon repressor

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21830 TetR family transcriptional regulator 0.94 0.68
    2 PS417_13395 phosphoglucomutase 0.46 0.45
    3 PS417_12805 glycogen branching protein no 0.44
    4 PS417_06135 glycerol-3-phosphate acyltransferase 0.61 0.42
    5 PS417_12215 lytic transglycosylase 0.87 0.41
    6 PS417_16510 Clp protease ClpX 0.65 0.39
    7 PS417_21420 aminodeoxychorismate lyase 0.74 0.38
    8 PS417_27445 membrane protein 0.64 0.36
    9 PS417_26715 peptidase P60 0.43 0.35
    10 PS417_15380 hypothetical protein no 0.34
    11 PS417_26750 homoserine acetyltransferase no 0.34
    12 PS417_26235 (Fe-S)-binding protein no 0.33
    13 PS417_25790 aminoglycoside phosphotransferase 0.92 0.33
    14 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase 0.67 0.32
    15 PS417_17275 hypothetical protein no 0.32
    16 PS417_22780 XRE family transcriptional regulator 0.52 0.32
    17 PS417_25645 peptidase M23 0.55 0.32
    18 PS417_25120 capsular biosynthesis protein no 0.31
    19 PS417_00300 cytochrome B559 subunit alpha 0.69 0.30
    20 PS417_20080 peptidase P60 0.83 0.30

    Or look for negative cofitness