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  • Top cofit genes for PS417_06770 from Pseudomonas simiae WCS417

    multidrug transporter
    SEED: RND efflux system, inner membrane transporter CmeB
    KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06775 antibiotic transporter 0.99 0.92
    2 PS417_00655 DSBA oxidoreductase no 0.62
    3 PS417_03990 ligand-gated channel protein no 0.60
    4 PS417_00665 RND transporter 0.30 0.60
    5 PS417_19940 membrane protein 0.43 0.59
    6 PS417_15075 NAD-glutamate dehydrogenase 0.22 0.59
    7 PS417_05590 iron ABC transporter ATP-binding protein 0.70 0.57
    8 PS417_24780 peptidase C13 0.61 0.57
    9 PS417_02255 lipopolysaccharide kinase 0.87 0.56
    10 PS417_28070 phosphate ABC transporter ATP-binding protein 0.63 0.56
    11 PS417_00440 N-acetylmuramoyl-L-alanine amidase 0.69 0.55
    12 PS417_03625 lipid A 3-O-deacylase no 0.55
    13 PS417_00660 DSBA oxidoreductase 0.30 0.52
    14 PS417_26500 thioesterase no 0.52
    15 PS417_07515 aconitate hydratase 0.36 0.50
    16 PS417_28080 phosphate ABC transporter permease 0.60 0.50
    17 PS417_20130 dehydrogenase 0.71 0.50
    18 PS417_28085 phosphate-binding protein 0.27 0.49
    19 PS417_25405 catalase 0.42 0.48
    20 PS417_22735 thiol oxidoreductase 0.70 0.48

    Or look for negative cofitness