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  • Top cofit genes for PS417_06715 from Pseudomonas simiae WCS417

    protocatechuate 3,4-dioxygenase
    SEED: Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
    KEGG: protocatechuate 3,4-dioxygenase, beta subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11935 ABC transporter substrate-binding protein no 0.21
    2 PS417_22580 membrane protein no 0.20
    3 PS417_12845 NAD(P)H dehydrogenase no 0.20
    4 PS417_06720 protocatechuate 3,4-dioxygenase 0.96 0.19
    5 PS417_03085 type II secretion system protein F no 0.19
    6 PS417_04025 glycine/betaine ABC transporter permease no 0.18
    7 PS417_22200 hypothetical protein no 0.18
    8 PS417_17170 carbon-nitrogen hydrolase 0.30 0.18
    9 PS417_22605 membrane protein no 0.17
    10 PS417_22550 ATP-binding protein no 0.17
    11 PS417_07485 hypothetical protein no 0.17
    12 PS417_15285 type VI secretion protein no 0.17
    13 PS417_21375 ADP-ribosylglycohydrolase no 0.16
    14 PS417_18605 LysR family transcriptional regulator 0.34 0.16
    15 PS417_06985 metal ABC transporter ATPase no 0.16
    16 PS417_00960 transcriptional regulator no 0.16
    17 PS417_03460 type III secretion protein HrpI no 0.16
    18 PS417_00910 diguanylate cyclase no 0.16
    19 PS417_02985 diguanylate cyclase no 0.16
    20 PS417_19040 aspartate racemase no 0.16

    Or look for negative cofitness