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Cofit
Protein
Homologs
Top cofit genes for GFF1317 from
Hydrogenophaga sp. GW460-11-11-14-LB1
YrbA protein
SEED: YrbA protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1363
Transaldolase (EC 2.2.1.2)
no
0.78
2
GFF137
Glyoxylate carboligase (EC 4.1.1.47)
no
0.78
3
GFF370
AMP nucleosidase (EC 3.2.2.4)
0.60
0.78
4
GFF1268
Glutaredoxin-related protein
0.87
0.75
5
GFF1313
Histidinol-phosphate aminotransferase (EC 2.6.1.9)
0.73
0.74
6
GFF166
Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17)
0.55
0.73
7
GFF213
Guanine deaminase (EC 3.5.4.3)
no
0.70
8
GFF2601
FIG00787877: hypothetical protein
no
0.69
9
GFF5351
Predicted transcription regulator, contains HTH domain (MarR family)
no
0.69
10
GFF4273
Lysine decarboxylase family
no
0.69
11
GFF138
Hydroxypyruvate isomerase (EC 5.3.1.22)
0.31
0.68
12
GFF3311
5-Hydroxyisourate Hydrolase (HIUase) (EC 3.5.2.17)
0.25
0.68
13
GFF4553
N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)
0.57
0.67
14
GFF1699
Excinuclease ABC subunit A, dimeric form
no
0.64
15
GFF1766
Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79)
no
0.62
16
GFF3308
N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)
0.58
0.61
17
GFF5151
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
no
0.61
18
GFF4626
Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17)
0.69
0.61
19
GFF3309
Uricase (urate oxidase) (EC 1.7.3.3)
0.34
0.61
20
GFF1327
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
0.72
0.61
Or look for
negative cofitness