• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs

    • Top cofit genes for GFF1307 from Variovorax sp. SCN45

    Homoserine dehydrogenase (EC 1.1.1.3)
    SEED: Homoserine dehydrogenase (EC 1.1.1.3)
    KEGG: homoserine dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5586 Acetoin dehydrogenase E1 component beta-subunit (EC 2.3.1.190) no 0.52
    2 GFF6223 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.49
    3 GFF5738 Flagellar biosynthesis protein FliR no 0.48
    4 GFF5499 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.48
    5 GFF4684 Na+/H+ antiporter no 0.48
    6 GFF1753 LysR family transcriptional regulator lrhA no 0.47
    7 GFF6044 FIG00933533: hypothetical protein no 0.47
    8 GFF1545 Pyruvate dehydrogenase (quinone) (EC 1.2.5.1) no 0.47
    9 GFF541 Ser-tRNA(Ala) deacylase; Gly-tRNA(Ala) deacylase no 0.46
    10 GFF2917 Gluconolactonase (EC 3.1.1.17) no 0.46
    11 GFF1966 Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE no 0.45
    12 GFF7247 no description no 0.45
    13 GFF1264 Transcriptional regulator, Xre family no 0.45
    14 GFF7101 hypothetical protein no 0.44
    15 GFF5714 no description no 0.44
    16 GFF4117 Translation elongation factor Tu no 0.44
    17 GFF6212 Transcriptional regulator, AsnC family no 0.44
    18 GFF7367 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.43
    19 GFF2990 Probable hydrolase protein (EC 3.-.-.-) no 0.43
    20 GFF5373 Xylose isomerase-like TIM-barrel protein KPN_00539 no 0.43

    Or look for negative cofitness