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  • Top cofit genes for PS417_06630 from Pseudomonas simiae WCS417

    diguanylate phosphodiesterase
    SEED: Sensory box/GGDEF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20080 peptidase P60 no 0.22
    2 PS417_14760 membrane protein no 0.20
    3 PS417_27485 hypothetical protein 0.29 0.20
    4 PS417_23415 AraC family transcriptional regulator 0.31 0.19
    5 PS417_19775 chemotaxis protein CheY no 0.19
    6 PS417_12030 LysR family transcriptional regulator no 0.19
    7 PS417_20745 twitching motility protein PilT no 0.19
    8 PS417_11435 asparagine synthase no 0.18
    9 PS417_09420 LysR family transcriptional regulator no 0.18
    10 PS417_11430 EamA no 0.18
    11 PS417_11810 oxidoreductase 0.36 0.18
    12 PS417_14345 LysR family transcriptional regulator 0.36 0.18
    13 PS417_15575 histidine kinase no 0.17
    14 PS417_04280 carbon-nitrogen hydrolase no 0.17
    15 PS417_05885 potassium transporter Kup 0.48 0.17
    16 PS417_10260 peptidase no 0.17
    17 PS417_10550 DNA topoisomerase III no 0.17
    18 PS417_05925 spermidine/putrescine ABC transporter permease no 0.17
    19 PS417_03670 MerR family transcriptional regulator 0.31 0.17
    20 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) no 0.17

    Or look for negative cofitness