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  • Top cofit genes for GFF1305 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
    KEGG: general L-amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7059 Zinc uptake regulation protein Zur no 0.64
    2 GFF3559 no description no 0.60
    3 GFF1485 Transcriptional regulator, AraC family no 0.57
    4 GFF1192 no description no 0.57
    5 GFF1912 Transcriptional regulator, LysR family no 0.57
    6 GFF3978 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.56
    7 GFF4469 Cell division protein FtsA no 0.56
    8 GFF3782 hypothetical protein no 0.54
    9 GFF4107 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.54
    10 GFF1435 BUG/TctC family periplasmic protein no 0.53
    11 GFF2810 hypothetical protein no 0.53
    12 GFF3162 Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) no 0.53
    13 GFF7352 1,2-phenylacetyl-CoA epoxidase, subunit D (EC 1.14.13.149) no 0.53
    14 GFF929 Transcriptional regulator, IclR family no 0.53
    15 GFF1338 ABC transporter, permease protein 1 RSc1751 no 0.52
    16 GFF1340 ABC transporter, ATP-binding protein 1 RSc1753 no 0.52
    17 GFF6576 Conjugative transfer protein TrbE no 0.52
    18 GFF3633 hypothetical protein no 0.51
    19 GFF3831 Acetyltransferase, GNAT family no 0.51
    20 GFF1876 Dihydrodipicolinate synthase family no 0.51

    Or look for negative cofitness