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  • Top cofit genes for GFF1303 from Variovorax sp. SCN45

    Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)
    SEED: Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4)
    KEGG: general L-amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3057 Aspartate aminotransferase (EC 2.6.1.1) no 0.59
    2 GFF4169 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.55
    3 GFF3633 hypothetical protein no 0.54
    4 GFF854 hypothetical protein no 0.53
    5 GFF250 Homoserine/homoserine lactone efflux protein no 0.52
    6 GFF2531 Transcriptional regulator, AsnC family no 0.52
    7 GFF5379 Putative hydrolase 0.40 0.51
    8 GFF1265 cAMP-binding protein no 0.51
    9 GFF6417 BUG/TctC family periplasmic protein no 0.50
    10 GFF4393 Uncharacterized ABC1 family protein XCC_1720 no 0.49
    11 GFF2386 Response regulator BaeR no 0.49
    12 GFF1295 FIG00455815: hypothetical protein no 0.49
    13 GFF5969 Transcriptional regulator, GntR family no 0.48
    14 GFF668 Transcriptional regulator, LysR family no 0.48
    15 GFF3830 Uncharacterized MFS-type transporter no 0.47
    16 GFF4087 Cystathionine beta-lyase (EC 4.4.1.8) no 0.45
    17 GFF1027 Ribonuclease BN no 0.45
    18 GFF5101 Dihydroxy-acid dehydratase (EC 4.2.1.9) no 0.45
    19 GFF1431 no description no 0.45
    20 GFF5013 Citronellyl-CoA dehydrogenase no 0.45

    Or look for negative cofitness