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  • Top cofit genes for PS417_06605 from Pseudomonas simiae WCS417

    leucine/isoleucine/valine transporter permease subunit
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) 0.98 0.50
    2 PS417_26985 phosphoenolpyruvate-protein phosphotransferase 0.39 0.36
    3 PS417_16990 acyl-CoA dehydrogenase 0.45 0.36
    4 PS417_04060 dipeptide ABC transporter, permease component (from data) 0.71 0.35
    5 PS417_04070 porin no 0.34
    6 PS417_04075 peptide ABC transporter substrate-binding protein 0.86 0.32
    7 PS417_24710 lipoprotein no 0.31
    8 PS417_04055 peptide transporter 0.72 0.30
    9 PS417_23830 hypothetical protein no 0.30
    10 PS417_08580 histidine kinase 0.31 0.29
    11 PS417_04270 ribonuclease G 0.52 0.29
    12 PS417_21580 chemotaxis protein CheW no 0.29
    13 PS417_04900 amino acid ABC transporter substrate-binding protein 0.43 0.29
    14 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.29 0.28
    15 PS417_22780 XRE family transcriptional regulator 0.54 0.28
    16 PS417_12205 hypothetical protein 0.59 0.28
    17 PS417_12200 microcin ABC transporter permease 0.47 0.28
    18 PS417_22740 imelysin no 0.27
    19 PS417_02520 chemotaxis protein no 0.27
    20 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase no 0.26

    Or look for negative cofitness