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  • Top cofit genes for GFF1294 from Variovorax sp. SCN45

    Efflux transport system, outer membrane factor (OMF) lipoprotein
    SEED: RND efflux system, outer membrane lipoprotein CmeC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5783 hypothetical protein no 0.51
    2 GFF721 O-acetyl-ADP-ribose deacetylase no 0.51
    3 GFF1902 hypothetical protein no 0.49
    4 GFF4046 Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA no 0.49
    5 GFF4269 Uncharacterized SAM-dependent O-methyltransferase no 0.49
    6 GFF4946 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) no 0.48
    7 GFF4604 TesB-like acyl-CoA thioesterase 2 no 0.47
    8 GFF5289 hypothetical protein no 0.46
    9 GFF3781 Transcriptional regulator, AcrR family no 0.46
    10 GFF73 Probable haloacid dehalogenase no 0.46
    11 GFF1472 Tricarboxylate transport protein TctC no 0.45
    12 GFF1459 Glutathione S-transferase (EC 2.5.1.18) no 0.44
    13 GFF4090 Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) no 0.44
    14 GFF4014 Transcriptional regulator, ArsR family no 0.43
    15 GFF5793 Low-affinity inorganic phosphate transporter no 0.43
    16 GFF2201 hypothetical protein no 0.43
    17 GFF2950 Arsenite/antimonite:H+ antiporter ArsB no 0.42
    18 GFF6073 Tripartite tricarboxylate transporter TctA family no 0.42
    19 GFF1913 Short-chain dehydrogenase no 0.42
    20 GFF2931 no description no 0.42

    Or look for negative cofitness