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  • Top cofit genes for PS417_06570 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC no 0.20
    2 PS417_24745 gamma-glutamyl phosphate reductase no 0.20
    3 PS417_09785 hypothetical protein 0.40 0.20
    4 PS417_18770 hypothetical protein no 0.20
    5 PS417_26730 pyrroline-5-carboxylate reductase no 0.19
    6 PS417_15575 histidine kinase no 0.18
    7 PS417_18530 O-succinylhomoserine sulfhydrylase 0.58 0.18
    8 PS417_16245 Fis family transcriptional regulator no 0.18
    9 PS417_00430 endonuclease no 0.17
    10 PS417_08155 integration host factor subunit beta no 0.17
    11 PS417_01605 phosphoglycerate mutase no 0.17
    12 PS417_07970 hypothetical protein no 0.16
    13 PS417_25695 peroxiredoxin 0.30 0.16
    14 PS417_05255 hypothetical protein no 0.16
    15 PS417_02020 LysR family transcriptional regulator no 0.16
    16 PS417_26360 MFS transporter no 0.16
    17 PS417_07655 glycerophosphodiester phosphodiesterase 0.30 0.16
    18 PS417_05455 XRE family transcriptional regulator no 0.16
    19 PS417_28530 iron transporter 0.48 0.16
    20 PS417_05260 MFS transporter no 0.16

    Or look for negative cofitness