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  • Top cofit genes for PS417_00650 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00665 RND transporter 0.73 0.64
    2 PS417_00655 DSBA oxidoreductase 0.85 0.63
    3 PS417_03990 ligand-gated channel protein no 0.60
    4 PS417_00660 DSBA oxidoreductase 0.29 0.56
    5 PS417_05590 iron ABC transporter ATP-binding protein no 0.55
    6 PS417_14045 alkyl hydroperoxide reductase no 0.53
    7 PS417_10645 magnesium ABC transporter ATPase no 0.49
    8 PS417_22735 thiol oxidoreductase no 0.47
    9 PS417_26500 thioesterase no 0.45
    10 PS417_22195 peptidase no 0.45
    11 PS417_15075 NAD-glutamate dehydrogenase no 0.43
    12 PS417_04000 hypothetical protein no 0.43
    13 PS417_25405 catalase no 0.43
    14 PS417_11940 TonB-dependent receptor 0.22 0.42
    15 PS417_03995 Fe(II)-dependent oxygenase no 0.42
    16 PS417_07515 aconitate hydratase no 0.40
    17 PS417_11460 divalent metal cation transporter MntH no 0.40
    18 PS417_06770 multidrug transporter no 0.39
    19 PS417_22745 hypothetical protein 0.16 0.39
    20 PS417_06775 antibiotic transporter 0.14 0.38

    Or look for negative cofitness