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  • Top cofit genes for GFF1278 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6410 Histidine utilization repressor no 0.62
    2 GFF4977 Transcriptional regulator for ferulate or vanillate catabolism no 0.61
    3 GFF4333 Transcriptional regulator, LysR family no 0.56
    4 GFF169 Protein-glutamate methylesterase (EC 3.1.1.61) no 0.56
    5 GFF4719 hypothetical protein no 0.55
    6 GFF6393 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), C-terminal domain no 0.54
    7 GFF683 Transcriptional regulator, LysR family no 0.54
    8 GFF3267 RNA-binding protein no 0.53
    9 GFF17 hypothetical protein no 0.53
    10 GFF5071 AmpG permease no 0.52
    11 GFF2911 Predicted D-glucarate or D-galactorate regulator, GntR family no 0.52
    12 GFF2136 Ribokinase (EC 2.7.1.15) no 0.52
    13 GFF7412 no description no 0.51
    14 GFF3374 no description no 0.51
    15 GFF1229 4-hydroxybutyrate coenzyme A transferase no 0.50
    16 GFF3462 Urea ABC transporter, permease protein UrtC no 0.50
    17 GFF2304 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion no 0.50
    18 GFF6087 Transcriptional regulator, AcrR family no 0.50
    19 GFF3705 Amidases related to nicotinamidase no 0.50
    20 GFF4216 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.49

    Or look for negative cofitness