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  • Top cofit genes for PS417_06455 from Pseudomonas simiae WCS417

    Fe(II)-dependent oxygenase
    SEED: Iron-uptake factor PiuC
    KEGG: PKHD-type hydroxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11450 AraC family transcriptional regulator no 0.21
    2 PS417_15785 porin no 0.20
    3 PS417_24460 hypothetical protein no 0.20
    4 PS417_01190 diguanylate phosphodiesterase no 0.20
    5 PS417_15540 NUDIX hydrolase no 0.19
    6 PS417_16495 leucyl/phenylalanyl-tRNA--protein transferase no 0.19
    7 PS417_00245 oligopeptidase A 0.56 0.18
    8 PS417_23575 hypothetical protein no 0.18
    9 PS417_20595 hypothetical protein no 0.18
    10 PS417_25975 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) no 0.18
    11 PS417_20690 chemotaxis protein no 0.18
    12 PS417_23900 poly(A) polymerase no 0.18
    13 PS417_02255 lipopolysaccharide kinase no 0.18
    14 PS417_21750 acetyl-CoA synthetase no 0.17
    15 PS417_11495 oxidoreductase no 0.17
    16 PS417_07575 multifunctional fatty acid oxidation complex subunit alpha no 0.17
    17 PS417_27215 hypothetical protein no 0.17
    18 PS417_19615 chemotaxis protein CheW no 0.17
    19 PS417_01180 ribosomal protein S6 modification protein no 0.17
    20 PS417_09665 dimethylglycine dehydrogenase no 0.17

    Or look for negative cofitness