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  • Top cofit genes for GFF1267 from Variovorax sp. SCN45

    Probable lipoprotein signal peptide
    SEED: Probable lipoprotein signal peptide

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4092 Copper tolerance protein 0.26 0.58
    2 GFF7211 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.57
    3 GFF4188 Signal peptidase I (EC 3.4.21.89) no 0.57
    4 GFF1394 no description no 0.56
    5 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.55
    6 GFF4765 ADP-ribose pyrophosphatase (EC 3.6.1.13) no 0.55
    7 GFF4482 Transcriptional regulator MraZ no 0.54
    8 GFF6777 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.53
    9 GFF1629 Ferric reductase (1.6.99.14) no 0.53
    10 GFF736 hypothetical protein no 0.52
    11 GFF6623 Esterase/lipase no 0.52
    12 GFF4072 hypothetical protein no 0.52
    13 GFF3145 Two-component system response regulator QseB no 0.52
    14 GFF5600 no description no 0.51
    15 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) no 0.51
    16 GFF2107 no description no 0.51
    17 GFF674 no description no 0.51
    18 GFF3587 KEGG: putative spermidine/putrescine transport system ATP-binding protein no 0.51
    19 GFF2517 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase no 0.50
    20 GFF2702 FAD-dependent oxidoreductase no 0.49

    Or look for negative cofitness