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  • Top cofit genes for PS417_06410 from Pseudomonas simiae WCS417

    amino acid ABC transporter permease
    SEED: Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1)
    KEGG: histidine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17510 histidine kinase no 0.23
    2 PS417_28160 hypothetical protein no 0.22
    3 PS417_11885 Inositol transport system sugar-binding protein (from data) no 0.21
    4 PS417_11895 Inositol transport system permease protein (from data) no 0.21
    5 PS417_12400 oxidoreductase no 0.21
    6 PS417_16035 ABC transporter substrate-binding protein no 0.21
    7 PS417_06405 amino acid ABC transporter permease 0.85 0.21
    8 PS417_17485 membrane protein no 0.20
    9 PS417_17515 GfdT protein no 0.19
    10 PS417_11170 aldehyde dehydrogenase no 0.19
    11 PS417_22230 class I peptide chain release factor no 0.18
    12 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.58 0.18
    13 PS417_25715 anthranilate phosphoribosyltransferase no 0.18
    14 PS417_21030 GntR family transcriptional regulator no 0.18
    15 PS417_27680 acetyl-CoA hydrolase no 0.18
    16 PS417_11870 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data) 0.32 0.18
    17 PS417_21035 multidrug transporter no 0.17
    18 PS417_16260 TonB-dependent receptor no 0.17
    19 PS417_15655 hypothetical protein no 0.17
    20 PS417_12290 sulfite reductase 0.43 0.17

    Or look for negative cofitness