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  • Top cofit genes for PS417_06405 from Pseudomonas simiae WCS417

    amino acid ABC transporter permease
    SEED: Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
    KEGG: histidine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21575 chemotaxis protein no 0.40
    2 PS417_19840 flagellar cap protein FliD 0.43 0.40
    3 PS417_21565 flagellar basal body rod protein FlgC 0.45 0.40
    4 PS417_19885 flagellar basal body rod protein FlgG 0.44 0.39
    5 PS417_19825 ATPase AAA no 0.39
    6 PS417_19710 flagellar biosynthesis protein FlhA 0.42 0.39
    7 PS417_21555 flagellar hook protein FlgE 0.42 0.39
    8 PS417_19860 flagellar hook protein FlgL no 0.39
    9 PS417_19880 flagellar basal body L-ring protein 0.49 0.39
    10 PS417_19870 flagellar rod assembly protein FlgJ no 0.38
    11 PS417_19865 flagellar hook protein FlgK 0.44 0.38
    12 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA no 0.37
    13 PS417_19745 flagellar assembly protein FliO no 0.37
    14 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.37
    15 PS417_19690 histidine kinase 0.34 0.37
    16 PS417_21595 flagellar biosynthesis protein FlgN no 0.37
    17 PS417_05635 membrane protein 0.61 0.37
    18 PS417_19835 flagellar biosynthesis protein FliS 0.55 0.37
    19 PS417_19695 flagellar biosynthesis sigma factor 0.42 0.36
    20 PS417_19740 flagellar biosynthesis protein flip 0.53 0.36

    Or look for negative cofitness