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  • Top cofit genes for PS417_06395 from Pseudomonas simiae WCS417

    amino acid transporter
    SEED: Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
    KEGG: histidine transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_23770 exodeoxyribonuclease V subunit alpha 0.54 0.22
    2 PS417_20580 isocitrate dehydrogenase 0.22 0.21
    3 PS417_24030 MFS transporter no 0.21
    4 PS417_15030 short-chain dehydrogenase no 0.20
    5 PS417_15455 ABC transporter substrate-binding protein no 0.19
    6 PS417_00350 methionine ABC transporter substrate-binding protein 0.58 0.18
    7 PS417_21550 hypothetical protein no 0.18
    8 PS417_07010 pseudouridine synthase 0.24 0.18
    9 PS417_13685 HxlR family transcriptional regulator no 0.18
    10 PS417_13695 porin no 0.17
    11 PS417_07095 histidine kinase no 0.17
    12 PS417_21185 hypothetical protein no 0.17
    13 PS417_08520 hypothetical protein no 0.17
    14 PS417_00480 hypothetical protein no 0.17
    15 PS417_24275 diguanylate phosphodiesterase no 0.17
    16 PS417_18530 O-succinylhomoserine sulfhydrylase no 0.17
    17 PS417_10150 tail protein no 0.16
    18 PS417_18585 3-isopropylmalate dehydrogenase 0.55 0.16
    19 PS417_24120 integrase no 0.16
    20 PS417_23800 ketol-acid reductoisomerase no 0.16

    Or look for negative cofitness