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  • Top cofit genes for GFF1257 from Variovorax sp. SCN45

    Organosulfonate utilization protein SsuF
    SEED: Organosulfonate utilization protein SsuF

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7328 no description no 0.61
    2 GFF3956 no description no 0.60
    3 GFF1671 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.60
    4 GFF3131 VgrG protein no 0.57
    5 GFF6009 Acyl-CoA dehydrogenase STM0857 0.29 0.56
    6 GFF7331 FIG00956224: hypothetical protein no 0.56
    7 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.56
    8 GFF4043 Copper sensory histidine kinase CusS no 0.56
    9 GFF2598 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) no 0.55
    10 GFF6990 hypothetical protein no 0.55
    11 GFF3070 no description no 0.54
    12 GFF4677 Small-conductance mechanosensitive channel 0.27 0.54
    13 GFF4347 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.54
    14 GFF6479 hypothetical protein no 0.53
    15 GFF5631 DNA-binding domain of ModE no 0.53
    16 GFF3156 FIG00441737: hypothetical protein no 0.52
    17 GFF1215 Oligopeptide transport ATP-binding protein @ Glutathione ABC transporter, ATP-binding protein GsiA no 0.52
    18 GFF2345 Uncharacterized ferredoxin-like protein YfhL no 0.51
    19 GFF2905 surface antigen gene no 0.51
    20 GFF4345 hypothetical protein no 0.51

    Or look for negative cofitness