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  • Top cofit genes for PS417_06370 from Pseudomonas simiae WCS417

    cold-shock protein
    SEED: Cold shock protein CspA
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18355 DNA-binding protein 0.35 0.39
    2 PS417_11900 conjugal transfer protein TraR 0.36 0.33
    3 PS417_01955 peptidase 0.40 0.33
    4 PS417_23155 pilus assembly protein PilW 0.54 0.33
    5 PS417_15255 serine/threonine protein kinase 0.70 0.32
    6 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 0.71 0.32
    7 PS417_27245 aminotransferase DegT no 0.30
    8 PS417_18350 hypothetical protein 0.41 0.29
    9 PS417_01420 histidine kinase no 0.29
    10 PS417_15260 protein phosphatase no 0.28
    11 PS417_26055 cyclic nucleotide-binding protein no 0.28
    12 PS417_22480 ferritin 0.57 0.28
    13 PS417_04585 hypothetical protein 0.51 0.28
    14 PS417_07710 membrane protein no 0.28
    15 PS417_19055 ArsR family transcriptional regulator no 0.28
    16 PS417_01395 biofilm formation protein PelB no 0.28
    17 PS417_02435 flagellar motor protein MotA no 0.27
    18 PS417_26650 histidine kinase 0.50 0.27
    19 PS417_01415 glycosyl transferase family 1 no 0.26
    20 PS417_18360 hypothetical protein no 0.25

    Or look for negative cofitness