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  • Top cofit genes for GFF1252 from Variovorax sp. SCN45

    Alkanesulfonate ABC transporter permease protein SsuC
    SEED: Alkanesulfonates transport system permease protein
    KEGG: sulfonate/nitrate/taurine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF877 putative membrane protein no 0.58
    2 GFF6073 Tripartite tricarboxylate transporter TctA family no 0.58
    3 GFF5938 T6SS component TssF (ImpG/VasA) no 0.58
    4 GFF5999 DNA polymerase IV (EC 2.7.7.7) no 0.56
    5 GFF2606 Tripartite tricarboxylate transporter TctC family no 0.55
    6 GFF6111 Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) 0.43 0.53
    7 GFF3438 Amidohydrolase family protein no 0.53
    8 GFF786 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.53
    9 GFF1263 Serine acetyltransferase (EC 2.3.1.30) 0.45 0.53
    10 GFF4158 hypothetical protein no 0.53
    11 GFF1016 no description no 0.51
    12 GFF5807 hypothetical protein no 0.51
    13 GFF2432 Fe2+-dicitrate sensor, membrane component no 0.51
    14 GFF2605 Tricarboxylate transport sensor protein TctE no 0.50
    15 GFF6765 Uncharacterized MFS-type transporter 0.21 0.50
    16 GFF6734 Transcriptional regulator, AraC family no 0.50
    17 GFF5189 L-arabinolactonase (EC 3.1.1.15) no 0.49
    18 GFF5994 Chlorogenate esterase no 0.49
    19 GFF1472 Tricarboxylate transport protein TctC no 0.49
    20 GFF5668 Uncharacterized MFS-type transporter 0.21 0.48

    Or look for negative cofitness