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  • Top cofit genes for GFF1250 from Variovorax sp. SCN45

    Alkanesulfonate ABC transporter substrate-binding protein SsuA
    SEED: Alkanesulfonates-binding protein
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination 0.38 0.53
    2 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.53
    3 GFF3544 no description no 0.52
    4 GFF140 Putative transport protein no 0.51
    5 GFF307 FIG143263: Glycosyl transferase no 0.49
    6 GFF4112 Rhodanese-related sulfurtransferase, 4 domains no 0.47
    7 GFF7184 hypothetical protein no 0.47
    8 GFF3209 no description no 0.47
    9 GFF4093 no description no 0.47
    10 GFF6614 hypothetical protein no 0.46
    11 GFF759 FIG01121861: hypothetical protein no 0.46
    12 GFF92 KEGG: general secretion pathway protein I no 0.45
    13 GFF6717 hypothetical protein no 0.45
    14 GFF1097 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.25 0.45
    15 GFF2230 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) no 0.45
    16 GFF5728 Methyl-accepting chemotaxis sensor/transducer protein no 0.44
    17 GFF2713 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.44
    18 GFF910 hypothetical protein no 0.44
    19 GFF565 Prepilin-type cleavage/methylation-like protein no 0.44
    20 GFF2372 Similar to citrate lyase beta chain, 3 no 0.44

    Or look for negative cofitness