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Gene
Fitness
Nearby
Cofit
Protein
Homologs
Top cofit genes for GFF1250 from
Hydrogenophaga sp. GW460-11-11-14-LB1
Transporter
SEED: Transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1741
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
0.50
0.89
2
GFF1740
Transcriptional regulator, AsnC family
no
0.89
3
GFF3587
Formiminoglutamase (EC 3.5.3.8)
no
0.88
4
GFF5731
3'-to-5' oligoribonuclease (orn)
0.46
0.86
5
GFF1715
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
no
0.85
6
GFF2936
Proposed lipoate regulatory protein YbeD
0.50
0.84
7
GFF1716
Transcriptional regulator, AraC family
no
0.82
8
GFF4691
Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein
no
0.82
9
GFF2897
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.81
10
GFF3345
PROBABLE TRANSMEMBRANE PROTEIN
no
0.81
11
GFF5759
Glutaryl-CoA dehydrogenase (EC 1.3.99.7)
0.53
0.80
12
GFF1683
Protein involved in catabolism of external DNA
0.62
0.80
13
GFF3357
tRNA pseudouridine synthase A (EC 4.2.1.70)
0.49
0.80
14
GFF1011
Transcriptional regulator, IclR family
no
0.80
15
GFF4692
Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1)
no
0.80
16
GFF1965
hypothetical protein
no
0.80
17
GFF4592
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
no
0.80
18
GFF4693
Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
no
0.79
19
GFF2896
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
no
0.78
20
GFF4006
Aromatic-amino-acid aminotransferase (EC 2.6.1.57)
no
0.78
Or look for
negative cofitness