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  • Top cofit genes for PS417_06345 from Pseudomonas simiae WCS417

    pseudouridine synthase
    SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
    KEGG: tRNA pseudouridine synthase D

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02660 branched-chain amino acid transporter permease subunit LivH no 0.26
    2 PS417_01635 nitrogen regulation protein NR(I) 0.55 0.24
    3 PS417_01420 histidine kinase no 0.23
    4 PS417_01395 biofilm formation protein PelB no 0.23
    5 PS417_19690 histidine kinase 0.38 0.23
    6 PS417_02610 hypothetical protein 0.38 0.23
    7 PS417_01990 cell division protein 0.24 0.22
    8 PS417_12310 methionine synthase 0.46 0.22
    9 PS417_02665 branched-chain amino acid ABC transporter permease 0.35 0.22
    10 PS417_24840 hypothetical protein no 0.22
    11 PS417_06370 cold-shock protein no 0.21
    12 PS417_19785 flagellar biogenesis protein 0.30 0.21
    13 PS417_20105 glycosyl transferase no 0.21
    14 PS417_04290 hypothetical protein 0.60 0.21
    15 PS417_01415 glycosyl transferase family 1 0.36 0.21
    16 PS417_21755 hypothetical protein no 0.21
    17 PS417_19665 flagellar motor protein MotD 0.24 0.21
    18 PS417_19620 hypothetical protein 0.41 0.20
    19 PS417_19660 cobalamin biosynthesis protein CobQ 0.24 0.20
    20 PS417_26370 RNA helicase 0.28 0.20

    Or look for negative cofitness