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  • Top cofit genes for PS417_06325 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family, in formaldehyde detoxification operon

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11460 divalent metal cation transporter MntH no 0.66
    2 PS417_06330 S-(hydroxymethyl)glutathione dehydrogenase 0.81 0.63
    3 PS417_25405 catalase 0.37 0.61
    4 PS417_26500 thioesterase no 0.56
    5 PS417_06335 S-formylglutathione hydrolase 0.82 0.52
    6 PS417_03625 lipid A 3-O-deacylase 0.30 0.50
    7 PS417_00440 N-acetylmuramoyl-L-alanine amidase 0.33 0.49
    8 PS417_03990 ligand-gated channel protein no 0.47
    9 PS417_25400 bacterioferritin 0.21 0.47
    10 PS417_07515 aconitate hydratase no 0.46
    11 PS417_00475 membrane protein 0.35 0.46
    12 PS417_15075 NAD-glutamate dehydrogenase no 0.45
    13 PS417_28070 phosphate ABC transporter ATP-binding protein 0.59 0.44
    14 PS417_28075 phosphate ABC transporter permease no 0.42
    15 PS417_10645 magnesium ABC transporter ATPase no 0.42
    16 PS417_00665 RND transporter no 0.42
    17 PS417_00655 DSBA oxidoreductase no 0.42
    18 PS417_28080 phosphate ABC transporter permease 0.52 0.41
    19 PS417_03830 protein disaggregation chaperone 0.41 0.40
    20 PS417_27255 glycine cleavage system protein T 0.21 0.40

    Or look for negative cofitness