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  • Top cofit genes for GFF1243 from Variovorax sp. SCN45

    transglutaminase, N-terminal domain protein
    SEED: transglutaminase, N-terminal domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5103 Class II aldolase/adducin, N-terminal no 0.54
    2 GFF2738 hypothetical protein no 0.54
    3 GFF4645 GGDEF domain protein no 0.54
    4 GFF1318 hypothetical protein no 0.53
    5 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.53
    6 GFF1266 Cysteine desulfurase (EC 2.8.1.7) no 0.52
    7 GFF803 MutT/Nudix family protein no 0.51
    8 GFF2557 transport-associated no 0.51
    9 GFF1320 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.50
    10 GFF7019 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.50
    11 GFF791 RNA polymerase sigma factor RpoE no 0.49
    12 GFF3372 hypothetical protein no 0.49
    13 GFF1744 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.48
    14 GFF1128 Alkyl hydroperoxide reductase subunit C-like protein no 0.48
    15 GFF7359 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.48
    16 GFF2083 putative periplasmic membrane protein no 0.47
    17 GFF1124 no description no 0.47
    18 GFF1027 Ribonuclease BN no 0.47
    19 GFF1049 low-specificity D-threonine aldolase no 0.47
    20 GFF6927 Transcriptional regulator, ArsR family no 0.46

    Or look for negative cofitness