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  • Top cofit genes for GFF1232 from Variovorax sp. SCN45

    Uncharacterized protein conserved in bacteria
    SEED: Uncharacterized protein conserved in bacteria

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF452 Chloride channel protein no 0.68
    2 GFF767 Alpha-amylase (EC 3.2.1.1) 0.35 0.66
    3 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.65
    4 GFF7085 BUG/TctC family periplasmic protein no 0.63
    5 GFF2182 Inner membrane component of TAM transport system no 0.62
    6 GFF2183 Outer membrane component of TAM transport system no 0.62
    7 GFF6003 no description no 0.59
    8 GFF5117 Transcriptional regulator, LysR family no 0.58
    9 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.58
    10 GFF4530 MBL-fold metallo-hydrolase superfamily no 0.58
    11 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.58
    12 GFF5021 Tripartite tricarboxylate transporter TctA family no 0.57
    13 GFF6743 no description no 0.57
    14 GFF6022 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) no 0.56
    15 GFF6878 hypothetical protein no 0.56
    16 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27) no 0.56
    17 GFF3153 Two-component transcriptional response regulator, LuxR family 0.30 0.55
    18 GFF6638 no description no 0.55
    19 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) no 0.55
    20 GFF4264 surface antigen gene no 0.55

    Or look for negative cofitness