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  • Top cofit genes for PS417_00620 from Pseudomonas simiae WCS417

    GntR family transcriptional regulator
    SEED: Predicted regulator PutR for proline utilization, GntR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27605 hypothetical protein no 0.46
    2 PS417_21040 sulfurylase no 0.45
    3 PS417_17515 GfdT protein no 0.44
    4 PS417_06365 RNA polymerase sigma factor 0.55 0.43
    5 PS417_13425 cupin no 0.43
    6 PS417_12610 RNA polymerase sigma factor no 0.42
    7 PS417_22230 class I peptide chain release factor no 0.42
    8 PS417_21050 serine acetyltransferase no 0.41
    9 PS417_20955 secretion protein 0.38 0.39
    10 PS417_21045 cysteine synthase no 0.39
    11 PS417_15565 transketolase no 0.38
    12 PS417_24605 thiamine-phosphate pyrophosphorylase no 0.37
    13 PS417_04995 glutathione S-transferase no 0.37
    14 PS417_16070 TonB-dependent receptor no 0.36
    15 PS417_15835 universal stress protein 0.45 0.36
    16 PS417_12475 hypothetical protein no 0.36
    17 PS417_27475 membrane protein 0.65 0.36
    18 PS417_15570 excinuclease ABC subunit A no 0.36
    19 PS417_26255 hypothetical protein no 0.36
    20 PS417_09690 sugar dehydrogenase no 0.36

    Or look for negative cofitness