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  • Top cofit genes for GFF1225 from Variovorax sp. SCN45

    Glycine/D-amino acid oxidases (deaminating)
    SEED: Sarcosine oxidase beta subunit (EC 1.5.3.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7344 Transcriptional regulator, LysR family no 0.62
    2 GFF4077 hypothetical protein no 0.56
    3 GFF907 Transcriptional regulator, LysR family no 0.55
    4 GFF1771 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.54
    5 GFF5811 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB-like no 0.53
    6 GFF2746 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) no 0.53
    7 GFF756 no description no 0.51
    8 GFF1527 Ferrichrome-iron receptor no 0.51
    9 GFF96 RNA polymerase ECF-type sigma factor no 0.51
    10 GFF5938 T6SS component TssF (ImpG/VasA) no 0.50
    11 GFF336 no description no 0.50
    12 GFF1409 hypothetical protein no 0.49
    13 GFF1154 Putative transmembrane protein no 0.48
    14 GFF2183 Outer membrane component of TAM transport system 0.44 0.48
    15 GFF43 hypothetical protein no 0.48
    16 GFF1386 Uncharacterized transporter YebQ, major facilitator superfamily (MFS) no 0.48
    17 GFF872 Hemin ABC transporter, permease protein no 0.48
    18 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) no 0.48
    19 GFF2982 Histone acetyltransferase HPA2 and related acetyltransferases 0.29 0.48
    20 GFF2707 hypothetical protein no 0.47

    Or look for negative cofitness