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  • Top cofit genes for GFF1224 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3038 hypothetical protein no 0.58
    2 GFF4945 probable GntR-family transcriptional regulator no 0.55
    3 GFF1337 ABC transporter, substrate-binding protein RSc1750 no 0.54
    4 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD no 0.53
    5 GFF3061 BUG/TctC family periplasmic protein no 0.53
    6 GFF2025 Uncharacterized protein SCO3165 no 0.52
    7 GFF725 TonB-dependent siderophore receptor no 0.52
    8 GFF2602 no description no 0.51
    9 GFF610 hypothetical protein no 0.51
    10 GFF4548 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.50
    11 GFF5232 5'-nucleotidase (EC 3.1.3.5) no 0.50
    12 GFF2374 Transcription elongation factor GreB no 0.50
    13 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA no 0.50
    14 GFF891 Gfa-like protein no 0.49
    15 GFF2623 Aspartate aminotransferase no 0.49
    16 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.48
    17 GFF2229 Pca regulon regulatory protein PcaR no 0.48
    18 GFF2290 Chromosome partitioning protein ParA no 0.48
    19 GFF3127 no description no 0.48
    20 GFF6604 FIG00457034: hypothetical protein no 0.48

    Or look for negative cofitness