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Cofit
Protein
Homologs
Top cofit genes for GFF1223 from
Variovorax sp. SCN45
Aldo/keto reductase, SMc04056 family
SEED: Oxidoreductase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2338
Amidase family protein Atu4441
no
0.58
2
GFF2723
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
no
0.58
3
GFF1977
L-asparaginase (EC 3.5.1.1)
0.74
0.56
4
GFF2163
hypothetical protein
no
0.55
5
GFF2199
Type I secretion outer membrane protein, TolC family
no
0.54
6
GFF5239
hypothetical protein
no
0.54
7
GFF7110
no description
no
0.53
8
GFF6099
Ser/Thr protein phosphatase family protein
no
0.53
9
GFF122
Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
no
0.51
10
GFF6804
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.51
11
GFF6217
hypothetical protein
no
0.50
12
GFF3574
hypothetical protein
no
0.49
13
GFF1146
Pyrophosphate-energized proton pump (EC 3.6.1.1)
no
0.48
14
GFF4032
Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
no
0.48
15
GFF1457
Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) / Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)
no
0.48
16
GFF99
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.48
17
GFF4926
Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)
no
0.48
18
GFF3776
no description
no
0.47
19
GFF4348
hypothetical protein
no
0.47
20
GFF6347
AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination
no
0.47
Or look for
negative cofitness