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Cofit
Protein
Homologs
Top cofit genes for GFF1223 from
Sphingobium sp. HT1-2
Bis-ABC ATPase SMa2385
SEED: ABC transporter ATP-binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2237
predicted 2-keto-3-deoxyxylonate dehydratase
no
0.74
2
GFF2536
hypothetical protein
no
0.72
3
GFF1024
Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG
no
0.71
4
GFF2648
hypothetical protein
no
0.71
5
GFF759
hypothetical protein
no
0.68
6
GFF3918
Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT
no
0.68
7
GFF3698
hypothetical protein
no
0.68
8
GFF4677
Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family
no
0.67
9
GFF2552
hypothetical protein
no
0.66
10
GFF3731
Flagellum-specific ATP synthase FliI
0.62
0.66
11
GFF12
Phage portal (connector) protein
no
0.66
12
GFF868
Tryptophan halogenase
no
0.64
13
GFF3711
Flagellar hook protein FlgE
no
0.64
14
GFF1013
Purine/pyrimidine phosphoribosyl transferase (EC 2.4.2.-)
no
0.64
15
GFF2572
Ribonuclease HII (EC 3.1.26.4)
no
0.64
16
GFF5406
hypothetical protein
no
0.64
17
GFF2525
hypothetical protein
no
0.63
18
GFF4259
hypothetical protein
no
0.63
19
GFF108
S-adenosylmethionine:diacylgycerolhomoserine-N- methyltransferase, BtaB protein
no
0.63
20
GFF2240
D-xylose proton-symporter XylE
no
0.62
Or look for
negative cofitness