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  • Top cofit genes for GFF1218 from Variovorax sp. SCN45

    O-antigen acetylase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF372 PMID: 11481431 no 0.67
    2 GFF6875 hypothetical protein no 0.61
    3 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.61
    4 GFF6878 hypothetical protein no 0.60
    5 GFF5076 hypothetical protein no 0.57
    6 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.54
    7 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) 0.24 0.54
    8 GFF6022 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) no 0.54
    9 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.53
    10 GFF6036 DNA translocase FtsK no 0.53
    11 GFF2653 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) no 0.51
    12 GFF4389 Type IV secretory pathway, VirD2 components (relaxase) no 0.51
    13 GFF1440 Multidomain signal transduction protein including CheB-like methylesterase, CheR-like methyltransferase and BaeS-like histidine kinase no 0.51
    14 GFF6525 hypothetical protein no 0.50
    15 GFF4931 peptidase, family M14 no 0.50
    16 GFF7372 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) no 0.50
    17 GFF338 Chloramphenicol acetyltransferase (EC 2.3.1.28) no 0.48
    18 GFF305 uncharacterized domain / RidA/YER057c/UK114 superfamily, group 5 no 0.48
    19 GFF5957 Uncharacterized MFS-type transporter no 0.48
    20 GFF6102 hypothetical protein no 0.48

    Or look for negative cofitness