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Cofit
Protein
Homologs
Top cofit genes for GFF1218 from
Variovorax sp. SCN45
O-antigen acetylase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF372
PMID: 11481431
no
0.67
2
GFF6875
hypothetical protein
no
0.61
3
GFF6876
Aminotransferase, DegT/DnrJ/EryC1/StrS family
no
0.61
4
GFF6878
hypothetical protein
no
0.60
5
GFF5076
hypothetical protein
no
0.57
6
GFF6200
integral membrane sensor signal transduction histidine kinase
no
0.54
7
GFF5307
Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241)
0.24
0.54
8
GFF6022
UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)
no
0.54
9
GFF6042
Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1)
no
0.53
10
GFF6036
DNA translocase FtsK
no
0.53
11
GFF2653
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
no
0.51
12
GFF4389
Type IV secretory pathway, VirD2 components (relaxase)
no
0.51
13
GFF1440
Multidomain signal transduction protein including CheB-like methylesterase, CheR-like methyltransferase and BaeS-like histidine kinase
no
0.51
14
GFF6525
hypothetical protein
no
0.50
15
GFF4931
peptidase, family M14
no
0.50
16
GFF7372
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)
no
0.50
17
GFF338
Chloramphenicol acetyltransferase (EC 2.3.1.28)
no
0.48
18
GFF305
uncharacterized domain / RidA/YER057c/UK114 superfamily, group 5
no
0.48
19
GFF5957
Uncharacterized MFS-type transporter
no
0.48
20
GFF6102
hypothetical protein
no
0.48
Or look for
negative cofitness