Top cofit genes for GFF1217 from Variovorax sp. SCN45

Transcriptional regulator RpiR in protein degradation cluster
SEED: Transcriptional regulator RpiR in protein degradation cluster

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF6389		Amidohydrolase domain protein	no	0.59
2	GFF6637		Putative amidase amiC (EC 3.5.1.4)	no	0.56
3	GFF7004		Flagellar biosynthesis protein FlhA	no	0.53
4	GFF4402		Mobile element protein	no	0.51
5	GFF1828		phosphodiesterase I	no	0.51
6	GFF5935		VgrG protein	no	0.51
7	GFF6827		Glutamine amidotransferase, class I	no	0.50
8	GFF2416		Transcriptional regulator YbhD, LysR family	no	0.50
9	GFF3937		Transcriptional regulator, AraC family	no	0.49
10	GFF4382		FIG00957806: hypothetical protein	0.30	0.49
11	GFF360		Putative transporter	no	0.49
12	GFF1880		Previously called glutamate synthase [NADPH] small chain	no	0.49
13	GFF4589		no description	no	0.49
14	GFF1555		Transcriptional regulator, LysR family	no	0.48
15	GFF3504		BUG/TctC family periplasmic protein	no	0.48
16	GFF6210		ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)	no	0.48
17	GFF1252		Alkanesulfonate ABC transporter permease protein SsuC	no	0.47
18	GFF3689		FIG01198523: hypothetical protein	no	0.47
19	GFF2550		Dihydroneopterin triphosphate pyrophosphohydrolase type 2	no	0.47
20	GFF6392		hypothetical protein	no	0.47

Or look for negative cofitness