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  • Top cofit genes for GFF1215 from Variovorax sp. SCN45

    Oligopeptide transport ATP-binding protein @ Glutathione ABC transporter, ATP-binding protein GsiA
    SEED: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
    KEGG: glutathione transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1865 Transcriptional regulator, AraC family no 0.53
    2 GFF6538 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.53
    3 GFF1257 Organosulfonate utilization protein SsuF no 0.52
    4 GFF4094 no description no 0.51
    5 GFF3762 hypothetical protein no 0.51
    6 GFF5017 Translation initiation factor SUI1-related protein no 0.50
    7 GFF205 Nitroreductase family protein no 0.50
    8 GFF6822 Peptidase C14, caspase catalytic subunit p20 no 0.50
    9 GFF5031 ABC-type spermidine/putrescine transport systems, ATPase components 0.27 0.49
    10 GFF3956 no description no 0.49
    11 GFF5728 Methyl-accepting chemotaxis sensor/transducer protein no 0.49
    12 GFF5011 Geranyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.5) no 0.49
    13 GFF4328 hypothetical protein no 0.48
    14 GFF5631 DNA-binding domain of ModE no 0.47
    15 GFF406 hypothetical protein no 0.47
    16 GFF6048 Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) no 0.46
    17 GFF867 Oxidoreductase, GMC family no 0.45
    18 GFF7278 Transposase no 0.45
    19 GFF6318 Uncharacterized MFS-type transporter no 0.44
    20 GFF3398 benzoate degradation ring-cleavage hydrolase no 0.44

    Or look for negative cofitness