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  • Top cofit genes for GFF1210 from Variovorax sp. SCN45

    D-aminopeptidase dipeptide-binding protein DppA (EC 3.4.11.-)
    SEED: D-aminopeptidase dipeptide-binding protein DppA (EC 3.4.11.-)
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF312 FIG021862: membrane protein, exporter 0.27 0.67
    2 GFF4396 Mobile element protein no 0.62
    3 GFF7323 Transcriptional response regulatory protein GlrR no 0.60
    4 GFF890 Two-component system sensor histidine kinase no 0.59
    5 GFF3552 Hsp90xo protein no 0.59
    6 GFF4993 putative tetratricopeptide repeat family protein no 0.58
    7 GFF6526 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) 0.29 0.55
    8 GFF4023 no description no 0.54
    9 GFF6843 FIG00958542: hypothetical protein no 0.54
    10 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.54
    11 GFF4655 SAM-dependent methyltransferase no 0.54
    12 GFF2436 no description no 0.53
    13 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.53
    14 GFF7027 no description no 0.53
    15 GFF3650 FIG00932140: hypothetical protein no 0.53
    16 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) no 0.52
    17 GFF6049 Acyl-CoA dehydrogenase family protein no 0.52
    18 GFF3693 Oxidoreductase no 0.52
    19 GFF234 Protein QmcA (possibly involved in integral membrane quality control) no 0.52
    20 GFF6392 hypothetical protein no 0.51

    Or look for negative cofitness