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  • Top cofit genes for PS417_06140 from Pseudomonas simiae WCS417

    cold-shock protein
    SEED: Cold shock protein CspA
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18355 DNA-binding protein 0.82 0.30
    2 PS417_28250 cell wall assembly protein no 0.26
    3 PS417_27610 hypothetical protein no 0.25
    4 PS417_24680 murein transglycosylase no 0.23
    5 PS417_19445 membrane protein no 0.22
    6 PS417_08415 hypothetical protein no 0.22
    7 PS417_15695 molybdenum cofactor biosynthesis protein A no 0.22
    8 PS417_19055 ArsR family transcriptional regulator no 0.21
    9 PS417_11940 TonB-dependent receptor no 0.21
    10 PS417_09620 lipopolysaccharide biosynthesis protein no 0.21
    11 PS417_15690 ribonucleoside-triphosphate reductase no 0.21
    12 PS417_06770 multidrug transporter no 0.21
    13 PS417_10645 magnesium ABC transporter ATPase no 0.20
    14 PS417_09600 glycosyl transferase family 1 no 0.20
    15 PS417_18350 hypothetical protein 0.19 0.20
    16 PS417_22405 7-carboxy-7-deazaguanine synthase 0.22 0.20
    17 PS417_25970 diguanylate cyclase no 0.20
    18 PS417_18400 D-ribose ABC transporter, ATPase component RbsA (from data) 0.35 0.20
    19 PS417_26500 thioesterase no 0.20
    20 PS417_06775 antibiotic transporter 0.33 0.19

    Or look for negative cofitness