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  • Top cofit genes for GFF1208 from Variovorax sp. SCN45

    diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3769 FIG022979: MoxR-like ATPases no 0.58
    2 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain no 0.55
    3 GFF4700 Various polyols ABC transporter, permease protein 1 no 0.53
    4 GFF3604 Formate-dependent phosphoribosylglycinamide formyltransferase no 0.53
    5 GFF6121 FIG003461: hypothetical protein no 0.52
    6 GFF173 Hexuronate utilization operon transcriptional repressor ExuR no 0.52
    7 GFF5095 hypothetical protein no 0.52
    8 GFF6925 Acetyl-CoA synthetase (EC 6.2.1.1) no 0.51
    9 GFF6684 ABC transporter, ATP-binding protein no 0.51
    10 GFF1326 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) no 0.51
    11 GFF6655 Transcriptional regulator, GntR family no 0.51
    12 GFF5232 5'-nucleotidase (EC 3.1.3.5) no 0.50
    13 GFF3574 hypothetical protein no 0.50
    14 GFF62 hypothetical protein no 0.50
    15 GFF3710 Lactoylglutathione lyase and related lyases no 0.50
    16 GFF674 no description no 0.50
    17 GFF20 hypothetical protein no 0.49
    18 GFF5239 hypothetical protein no 0.49
    19 GFF2374 Transcription elongation factor GreB no 0.49
    20 GFF1269 no description no 0.49

    Or look for negative cofitness