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  • Top cofit genes for GFF1193 from Sphingobium sp. HT1-2

    Uncharacterized amino acid permease, GabP family
    SEED: amino acid transporter
    KEGG: basic amino acid/polyamine antiporter, APA family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2471 Polyphosphate kinase (EC 2.7.4.1) no 0.81
    2 GFF4093 SSU rRNA ## 16S rRNA, small subunit ribosomal RNA no 0.81
    3 GFF2467 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) / YjbR family protein no 0.81
    4 GFF2190 hypothetical protein no 0.79
    5 GFF1351 hypothetical protein no 0.78
    6 GFF631 hypothetical protein no 0.77
    7 GFF4234 hypothetical protein no 0.76
    8 GFF5056 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.73 0.76
    9 GFF2694 NreA-like protein no 0.76
    10 GFF4235 hypothetical protein no 0.76
    11 GFF1464 TonB-dependent receptor no 0.75
    12 GFF60 Pyruvate,phosphate dikinase (EC 2.7.9.1) no 0.75
    13 GFF1180 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) no 0.75
    14 GFF5381 LSU rRNA ## 23S rRNA, large subunit ribosomal RNA no 0.75
    15 GFF4516 putative integrase/recombinase no 0.75
    16 GFF4557 hypothetical protein no 0.74
    17 GFF951 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) 0.65 0.74
    18 GFF1200 Putative glycosyl hydrolase of unknown function (DUF1680) no 0.74
    19 GFF1147 Nitrogen regulation protein NtrY (EC 2.7.3.-) no 0.74
    20 GFF5045 hypothetical protein no 0.73

    Or look for negative cofitness