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Cofit
Protein
Homologs
Top cofit genes for GFF1180 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4930
Transcriptional regulator, LysR family
no
0.57
2
GFF3921
Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
no
0.49
3
GFF6677
regulatory protein
no
0.48
4
GFF4895
FIG074102: hypothetical protein
no
0.48
5
GFF1279
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.47
6
GFF5382
BUG/TctC family periplasmic protein
no
0.46
7
GFF1184
UPF0060 membrane protein YnfA
no
0.45
8
GFF6097
1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149)
no
0.43
9
GFF5595
no description
no
0.43
10
GFF7004
Flagellar biosynthesis protein FlhA
no
0.43
11
GFF1199
Uncharacterized protein similar to glutamate-1-semialdehyde aminotransferase
no
0.42
12
GFF7369
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
no
0.42
13
GFF4589
no description
no
0.41
14
GFF4989
Transcriptional regulator, LysR family
no
0.41
15
GFF6808
Peroxiredoxin OsmC (EC 1.11.1.15)
no
0.40
16
GFF6910
Xanthine permease
no
0.40
17
GFF3817
RNA polymerase sigma factor
no
0.40
18
GFF564
hypothetical protein
no
0.40
19
GFF3932
Acetyltransferase, GNAT family
no
0.39
20
GFF6135
ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.39
Or look for
negative cofitness