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  • Top cofit genes for GFF118 from Variovorax sp. SCN45

    putative membrane protein
    SEED: putative membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF706 hypothetical protein no 0.61
    2 GFF5240 General secretion pathway protein K no 0.60
    3 GFF6655 Transcriptional regulator, GntR family no 0.60
    4 GFF1769 Urease accessory protein UreD no 0.57
    5 GFF1678 Transcriptional regulator, GntR family no 0.56
    6 GFF2015 Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog no 0.55
    7 GFF7361 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) no 0.54
    8 GFF5127 no description no 0.54
    9 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain no 0.54
    10 GFF6774 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.54
    11 GFF3486 glutamine synthetase family protein no 0.53
    12 GFF2258 4-hydroxybenzoate transporter no 0.53
    13 GFF6425 no description no 0.52
    14 GFF3710 Lactoylglutathione lyase and related lyases no 0.52
    15 GFF7254 Mannonate dehydratase (EC 4.2.1.8) no 0.52
    16 GFF806 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) no 0.52
    17 GFF5221 Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) no 0.52
    18 GFF4548 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.52
    19 GFF1455 DNA polymerase II (EC 2.7.7.7) no 0.51
    20 GFF4892 FIG00715976: hypothetical protein no 0.50

    Or look for negative cofitness