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  • Top cofit genes for PS417_05990 from Pseudomonas simiae WCS417

    diguanylate cyclase
    SEED: diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
    KEGG: two-component system, chemotaxis family, response regulator WspR

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05980 chemotaxis protein CheA 0.71 0.43
    2 PS417_05970 chemotaxis protein CheR 0.81 0.41
    3 PS417_02985 diguanylate cyclase 0.57 0.35
    4 PS417_27610 hypothetical protein 0.36 0.34
    5 PS417_11900 conjugal transfer protein TraR no 0.31
    6 PS417_24265 ABC transporter ATP-binding protein 0.53 0.30
    7 PS417_26525 DEAD/DEAH box helicase no 0.30
    8 PS417_25970 diguanylate cyclase 0.56 0.30
    9 PS417_19185 toxin no 0.29
    10 PS417_26055 cyclic nucleotide-binding protein 0.48 0.28
    11 PS417_26405 diguanylate cyclase 0.20 0.28
    12 PS417_03085 type II secretion system protein F no 0.28
    13 PS417_27605 hypothetical protein 0.14 0.28
    14 PS417_04675 deoxyribonuclease 0.20 0.26
    15 PS417_18350 hypothetical protein no 0.25
    16 PS417_03050 hypothetical protein no 0.25
    17 PS417_19150 ABC transporter ATP-binding protein 0.44 0.25
    18 PS417_08595 histidine kinase no 0.25
    19 PS417_00910 diguanylate cyclase 0.24 0.24
    20 PS417_02870 TonB-dependent receptor 0.35 0.24

    Or look for negative cofitness