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  • Top cofit genes for PS417_05985 from Pseudomonas simiae WCS417

    chemotaxis protein CheY
    SEED: Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61)
    KEGG: two-component system, chemotaxis family, response regulator WspF

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02210 diguanylate cyclase 0.88 0.75
    2 PS417_19145 membrane protein 0.79 0.70
    3 PS417_03930 thymidine phosphorylase 0.42 0.64
    4 PS417_22190 diguanylate cyclase 0.89 0.63
    5 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.63
    6 PS417_07095 histidine kinase 0.78 0.56
    7 PS417_20585 chemotaxis protein no 0.55
    8 PS417_27665 diguanylate cyclase 0.74 0.54
    9 PS417_19625 histidine kinase no 0.54
    10 PS417_05975 chemotaxis protein CheW no 0.54
    11 PS417_19635 lipid kinase no 0.53
    12 PS417_19630 LuxR family transcriptional regulator 0.43 0.51
    13 PS417_13425 cupin no 0.50
    14 PS417_26520 amino acid ABC transporter substrate-binding protein 0.84 0.49
    15 PS417_12610 RNA polymerase sigma factor no 0.49
    16 PS417_12560 MFS transporter no 0.48
    17 PS417_12825 MFS transporter no 0.47
    18 PS417_16370 chemotaxis protein CheY 0.22 0.47
    19 PS417_21600 pilus assembly protein PilZ 0.47 0.47
    20 PS417_10720 chemotaxis protein CheY 0.25 0.46

    Or look for negative cofitness