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  • Top cofit genes for PS417_05980 from Pseudomonas simiae WCS417

    chemotaxis protein CheA
    SEED: Sensor histidine kinase/response regulator
    KEGG: two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05970 chemotaxis protein CheR 0.82 0.48
    2 PS417_05990 diguanylate cyclase 0.71 0.43
    3 PS417_27810 ribonuclease PH no 0.42
    4 PS417_09640 capsular biosynthesis protein 0.26 0.39
    5 PS417_26525 DEAD/DEAH box helicase no 0.37
    6 PS417_27610 hypothetical protein 0.14 0.37
    7 PS417_11445 enoyl-CoA hydratase no 0.36
    8 PS417_07615 TetR family transcriptional regulator no 0.35
    9 PS417_05960 chemotaxis protein 0.73 0.35
    10 PS417_11900 conjugal transfer protein TraR 0.20 0.33
    11 PS417_19560 amino acid ABC transporter substrate-binding protein 0.15 0.32
    12 PS417_05965 chemotaxis protein CheW 0.53 0.31
    13 PS417_19150 ABC transporter ATP-binding protein no 0.31
    14 PS417_09635 mannose-1-phosphate guanylyltransferase 0.15 0.30
    15 PS417_23155 pilus assembly protein PilW 0.39 0.30
    16 PS417_27605 hypothetical protein no 0.30
    17 PS417_09630 glycosyl transferase no 0.30
    18 PS417_17085 fimbrial assembly protein 0.29 0.29
    19 PS417_28300 N-acetylmuramoyl-L-alanine amidase no 0.29
    20 PS417_24595 histidine kinase no 0.28

    Or look for negative cofitness