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  • Top cofit genes for GFF1177 from Variovorax sp. SCN45

    Serine protease
    SEED: Outer membrane stress sensor protease DegS
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3851 Uncharacterized MFS-type transporter no 0.52
    2 GFF5502 Transcriptional regulator, LysR family no 0.51
    3 GFF2076 Alkyl sulfatase and related hydrolases, MBL-fold metallo-hydrolase superfamily no 0.51
    4 GFF6939 ABC-type antimicrobial peptide transport system, permease component 0.24 0.49
    5 GFF322 GTP cyclohydrolase II homolog no 0.49
    6 GFF4928 hypothetical protein no 0.48
    7 GFF6681 TonB-dependent siderophore receptor no 0.47
    8 GFF4069 DNA-binding heavy metal response regulator no 0.46
    9 GFF5845 NAD synthetase (EC 6.3.1.5) no 0.46
    10 GFF3909 Aconitate hydratase (EC 4.2.1.3) no 0.45
    11 GFF4422 Conjugative transfer protein TrbG no 0.44
    12 GFF419 hypothetical protein no 0.44
    13 GFF2566 AsmA no 0.44
    14 GFF3946 Probable low-affinity inorganic phosphate transporter 0.30 0.44
    15 GFF2094 Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54) homolog no 0.43
    16 GFF379 Ribonuclease HII (EC 3.1.26.4) no 0.43
    17 GFF5647 ABC transporter, ATP-binding protein (cluster 12, methionine/phosphonates) no 0.43
    18 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) no 0.43
    19 GFF6801 Transcriptional regulator, GntR family no 0.42
    20 GFF7225 hypothetical protein no 0.42

    Or look for negative cofitness