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  • Top cofit genes for GFF1176 from Variovorax sp. SCN45

    Sensory histidine kinase QseC
    SEED: Sensory histidine kinase QseC
    KEGG: two-component system, OmpR family, sensor kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6560 no description no 0.57
    2 GFF2756 Ribosylnicotinamide kinase (EC 2.7.1.22) no 0.56
    3 GFF4899 Transcriptional regulator, Crp/Fnr family no 0.52
    4 GFF1368 BUG/TctC family periplasmic protein no 0.50
    5 GFF2796 Dihydrodipicolinate synthase family protein PP2639 no 0.50
    6 GFF5965 hypothetical protein no 0.50
    7 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) no 0.49
    8 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.49
    9 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.76 0.48
    10 GFF1370 Transcriptional regulator associated with Tricarboxylic transport no 0.48
    11 GFF6342 Mobile element protein no 0.47
    12 GFF2823 Hemin transport protein HmuS no 0.47
    13 GFF6705 hypothetical protein no 0.47
    14 GFF5027 Aldehyde dehydrogenase B (EC 1.2.1.22) no 0.46
    15 GFF3597 TRAP-type C4-dicarboxylate transport system, small permease component no 0.46
    16 GFF1165 2-isopropylmalate synthase (EC 2.3.3.13) 0.35 0.46
    17 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.45
    18 GFF3864 Sigma factor RpoE negative regulatory protein RseA 0.79 0.45
    19 GFF195 RidA/YER057c/UK114 superfamily, group 1 no 0.44
    20 GFF542 no description no 0.44

    Or look for negative cofitness