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  • Top cofit genes for GFF1175 from Variovorax sp. SCN45

    Two-component system response regulator QseB
    SEED: Two-component system response regulator QseB
    KEGG: two-component system, OmpR family, response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2033 no description no 0.56
    2 GFF1185 Transcriptional regulator, AraC family no 0.54
    3 GFF1645 Sigma factor PvdS, controling pyoverdin biosynthesis 0.47 0.49
    4 GFF4713 Uncharacterized protein YhiN 0.63 0.49
    5 GFF810 Glutathione S-transferase (EC 2.5.1.18) no 0.49
    6 GFF2864 no description no 0.48
    7 GFF587 Multimeric flavodoxin WrbA 0.68 0.48
    8 GFF1013 hypothetical protein no 0.47
    9 GFF458 Aldoxime dehydratase no 0.47
    10 GFF3381 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.46
    11 GFF6556 hypothetical protein no 0.46
    12 GFF844 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.50 0.46
    13 GFF5032 ABC-type spermidine/putrescine transport system, permease component I 0.25 0.46
    14 GFF6793 hypothetical protein no 0.46
    15 GFF1965 Magnesium and cobalt efflux protein CorC 0.35 0.46
    16 GFF1465 ABC transporter spermidine/putrescine-binding protein no 0.45
    17 GFF1599 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) no 0.45
    18 GFF3947 Putative transmembrane protein no 0.45
    19 GFF6126 putative membrane protein no 0.45
    20 GFF869 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) no 0.44

    Or look for negative cofitness