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  • Top cofit genes for PS417_05960 from Pseudomonas simiae WCS417

    chemotaxis protein
    SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
    KEGG: methyl-accepting chemotaxis protein WspA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26800 cell division protein FtsX 0.66 0.38
    2 PS417_05980 chemotaxis protein CheA 0.73 0.35
    3 PS417_01600 peptidase M23 no 0.35
    4 PS417_03930 thymidine phosphorylase no 0.34
    5 PS417_21600 pilus assembly protein PilZ no 0.33
    6 PS417_26875 histidine kinase no 0.31
    7 PS417_19995 Long-chain fatty acid transport protein 0.66 0.31
    8 PS417_09640 capsular biosynthesis protein 0.37 0.30
    9 PS417_07615 TetR family transcriptional regulator 0.23 0.29
    10 PS417_05135 nucleoid-associated protein 0.34 0.27
    11 PS417_28250 cell wall assembly protein 0.57 0.27
    12 PS417_15100 BatB protein 0.48 0.26
    13 PS417_19365 ABC transporter substrate-binding protein no 0.26
    14 PS417_20575 ATP-dependent helicase HrpA 0.34 0.25
    15 PS417_09620 lipopolysaccharide biosynthesis protein no 0.25
    16 PS417_20180 agmatinase no 0.24
    17 PS417_24705 D-alanyl-D-alanine carboxypeptidase 0.22 0.24
    18 PS417_11445 enoyl-CoA hydratase no 0.24
    19 PS417_20175 LysR family transcriptional regulator no 0.24
    20 PS417_09630 glycosyl transferase no 0.23

    Or look for negative cofitness