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  • Top cofit genes for GFF1172 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6571 Conjugative transfer protein TrbI no 0.58
    2 GFF5965 hypothetical protein no 0.57
    3 GFF2799 Molybdopterin-guanine dinucleotide biosynthesis protein MobB no 0.57
    4 GFF5620 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.56
    5 GFF1598 no description no 0.55
    6 GFF1113 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.54
    7 GFF859 Lactoylglutathione lyase (EC 4.4.1.5) no 0.53
    8 GFF1570 Muconate cycloisomerase (EC 5.5.1.1) no 0.53
    9 GFF5374 Glutamine amidotransferase, class I no 0.53
    10 GFF6847 Ferric siderophore transport system, periplasmic binding protein TonB no 0.52
    11 GFF3769 FIG022979: MoxR-like ATPases no 0.52
    12 GFF6829 Glutathione S-transferase (EC 2.5.1.18) no 0.51
    13 GFF127 Orotate phosphoribosyltransferase (EC 2.4.2.10) no 0.51
    14 GFF329 Nucleoside ABC transporter, ATP-binding protein no 0.51
    15 GFF5392 no description no 0.49
    16 GFF6655 Transcriptional regulator, GntR family no 0.48
    17 GFF7172 Manganese transport protein MntH no 0.48
    18 GFF5618 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.48
    19 GFF6621 Mobile element protein no 0.47
    20 GFF5082 Uncharacterized MFS-type transporter no 0.47

    Or look for negative cofitness