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  • Top cofit genes for GFF1171 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family
    SEED: L-rhamnose operon transcriptional activator RhaR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6006 BUG/TctC family periplasmic protein no 0.60
    2 GFF556 no description no 0.58
    3 GFF4816 FIG01074109: hypothetical protein no 0.56
    4 GFF1394 no description no 0.55
    5 GFF6667 hypothetical protein no 0.55
    6 GFF6175 hypothetical protein no 0.55
    7 GFF905 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.55
    8 GFF6159 carbon monoxide dehydrogenase G protein no 0.54
    9 GFF4499 Uncharacterized DUF1427 protein PA2697 no 0.53
    10 GFF4614 Transcriptional regulator, AraC family no 0.52
    11 GFF4360 no description no 0.51
    12 GFF6138 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 no 0.50
    13 GFF6174 Fluoride ion transporter CrcB no 0.50
    14 GFF3433 hypothetical protein no 0.50
    15 GFF2592 no description no 0.50
    16 GFF1690 KEGG: DNA-binding protein H-NS no 0.49
    17 GFF3224 no description no 0.49
    18 GFF1990 Transcriptional regulator, MerR family no 0.49
    19 GFF3934 PhnB protein no 0.48
    20 GFF4072 hypothetical protein no 0.48

    Or look for negative cofitness